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HMGCLL1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104281793, updated on 3-Aug-2024

Summary

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Gene symbol
HMGCLL1
Gene description
3-hydroxy-3-methylglutaryl-CoA lyase like 1
Locus tag
N301_08721
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See HMGCLL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647231.1 (679653..739337, complement)

NW_009647231.1Genomic Context describing neighboring genes Neighboring gene hypocretin receptor 2 Neighboring gene GDNF family receptor alpha like Neighboring gene bone morphogenetic protein 5 Neighboring gene collagen type XXI alpha 1 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647231.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase L1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647231.1 Reference ASM70802v2

    Range
    679653..739337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009879840.1 → XP_009878142.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic

    UniProtKB/TrEMBL
    A0A0A0A508
    Conserved Domains (2) summary
    PLN02746
    Location:57 → 350
    PLN02746; hydroxymethylglutaryl-CoA lyase
    pfam00682
    Location:62 → 335
    HMGL-like; HMGL-like
Nucleotide Protein
Heading Accession and Version

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