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LDHB lactate dehydrogenase B [ Charadrius vociferus (killdeer) ]

Gene ID: 104281643, updated on 3-Aug-2024

Summary

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Gene symbol
LDHB
Gene description
lactate dehydrogenase B
Locus tag
N301_16229
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See LDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647222.1 (7420353..7430514)

NW_009647222.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 9 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene glycogen synthase 2 Neighboring gene inositol 1,4,5-triphosphate receptor associated 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647222.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-lactate dehydrogenase B chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647222.1 Reference ASM70802v2

    Range
    7420353..7430514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009879672.1 → XP_009877974.1  L-lactate dehydrogenase B chain isoform X1

    UniProtKB/TrEMBL
    A0A0A0A5Z7
    Conserved Domains (2) summary
    cd05293
    Location:19 → 329
    LDH_1; A subgroup of L-lactate dehydrogenases
    TIGR01771
    Location:25 → 325
    L-LDH-NAD; L-lactate dehydrogenase

  2. XM_009879673.1 → XP_009877975.1  L-lactate dehydrogenase B chain isoform X2

    Conserved Domains (2) summary
    cd05293
    Location:19 → 271
    LDH_1; A subgroup of L-lactate dehydrogenases
    TIGR01771
    Location:25 → 267
    L-LDH-NAD; L-lactate dehydrogenase
Nucleotide Protein
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