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LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104280226, updated on 3-Aug-2024

Summary

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Gene symbol
LFNG
Gene description
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Locus tag
N311_07692
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See LFNG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009697863.1 (7023..9769)

NW_009697863.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009697863.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
Names
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009697863.1 Reference ASM70340v1

    Range
    7023..9769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009877804.1 → XP_009876106.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

    See identical proteins and their annotated locations for XP_009876106.1

    UniProtKB/TrEMBL
    A0A091N077
    Conserved Domains (1) summary
    pfam02434
    Location:1 → 214
    Fringe; Fringe-like
Nucleotide Protein
Heading Accession and Version

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