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ASAH2 N-acylsphingosine amidohydrolase 2 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104279371, updated on 3-Aug-2024

Summary

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Gene symbol
ASAH2
Gene description
N-acylsphingosine amidohydrolase 2
Locus tag
N311_06849
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ASAH2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009735628.1 (55096..72860, complement)

NW_009735628.1Genomic Context describing neighboring genes Neighboring gene APOBEC1 complementation factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009735628.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acylsphingosine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral ceramidase
Names
Neutral ceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009735628.1 Reference ASM70340v1

    Range
    55096..72860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009876639.1 → XP_009874941.1  neutral ceramidase

    UniProtKB/TrEMBL
    A0A091NTB1
    Conserved Domains (3) summary
    PTZ00487
    Location:7 → 684
    PTZ00487; ceramidase; Provisional
    pfam04734
    Location:8 → 514
    Ceramidase_alk; Neutral/alkaline non-lysosomal ceramidase, N-terminal
    pfam17048
    Location:516 → 684
    Ceramidse_alk_C; Neutral/alkaline non-lysosomal ceramidase, C-terminal
Nucleotide Protein
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