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GAD2 glutamate decarboxylase 2 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104277346, updated on 18-Sep-2024

Summary

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Gene symbol
GAD2
Gene description
glutamate decarboxylase 2
Locus tag
N311_04186
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See GAD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009728066.1 (53610..90691, complement)

NW_009728066.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009728066.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyrate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate decarboxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009728066.1 Reference ASM70340v1

    Range
    53610..90691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009873956.1 → XP_009872258.1  glutamate decarboxylase 2

    UniProtKB/TrEMBL
    A0A091NQ72
    Conserved Domains (1) summary
    pfam00282
    Location:42 → 413
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain
Nucleotide Protein
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