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UGDH UDP-glucose 6-dehydrogenase [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104274295, updated on 3-Aug-2024

Summary

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Gene symbol
UGDH
Gene description
UDP-glucose 6-dehydrogenase
Locus tag
N311_06135
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Orthologs
human mouse all
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Genomic context

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See UGDH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009717462.1 (285..15791)

NW_009717462.1Genomic Context describing neighboring genes Neighboring gene lipoic acid synthetase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009717462.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucose 6-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 6-dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009717462.1 Reference ASM70340v1

    Range
    285..15791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009869889.1 → XP_009868191.1  UDP-glucose 6-dehydrogenase isoform X1

    See identical proteins and their annotated locations for XP_009868191.1

    UniProtKB/TrEMBL
    A0A091NHM9
    Conserved Domains (4) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase
    pfam00984
    Location:214 → 309
    UDPG_MGDP_dh; UDP-glucose/GDP-mannose dehydrogenase family, central domain
    pfam03720
    Location:332 → 446
    UDPG_MGDP_dh_C; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
    pfam03721
    Location:6 → 193
    UDPG_MGDP_dh_N; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

  2. XM_009869890.1 → XP_009868192.1  UDP-glucose 6-dehydrogenase isoform X2

    Conserved Domains (4) summary
    PLN02353
    Location:4 → 397
    PLN02353; probable UDP-glucose 6-dehydrogenase
    pfam00984
    Location:147 → 242
    UDPG_MGDP_dh; UDP-glucose/GDP-mannose dehydrogenase family, central domain
    pfam03720
    Location:265 → 379
    UDPG_MGDP_dh_C; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
    cl21454
    Location:6 → 126
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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