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SLC3A1 solute carrier family 3 member 1 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104272825, updated on 3-Aug-2024

Summary

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Gene symbol
SLC3A1
Gene description
solute carrier family 3 member 1
Locus tag
N311_08025
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009694553.1 (23765..38467)

NW_009694553.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene prolyl endopeptidase like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009694553.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral and basic amino acid transport protein rBAT
Names
Neutral and basic amino acid transport protein rBAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009694553.1 Reference ASM70340v1

    Range
    23765..38467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009867929.1 → XP_009866231.1  neutral and basic amino acid transport protein rBAT

    UniProtKB/TrEMBL
    A0A091MUF4
    Conserved Domains (3) summary
    cd11359
    Location:115 → 572
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
    TIGR02403
    Location:116 → 610
    trehalose_treC; alpha,alpha-phosphotrehalase
    pfam16028
    Location:64 → 122
    SLC3A2_N; Solute carrier family 3 member 2 N-terminus
Nucleotide Protein
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