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MAN2B2 mannosidase alpha class 2B member 2 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104272440, updated on 3-Aug-2024

Summary

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Gene symbol
MAN2B2
Gene description
mannosidase alpha class 2B member 2
Locus tag
N311_12421
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
Orthologs
human mouse all
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Genomic context

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See MAN2B2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009710893.1 (1202..28270)

NW_009710893.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein P

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009710893.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epididymis-specific alpha-mannosidase
Names
Epididymis-specific alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009710893.1 Reference ASM70340v1

    Range
    1202..28270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009867433.1 → XP_009865735.1  epididymis-specific alpha-mannosidase

    UniProtKB/TrEMBL
    A0A091NBP6
    Conserved Domains (3) summary
    smart00872
    Location:310 → 391
    Alpha-mann_mid; Alpha mannosidase, middle domain
    pfam07748
    Location:537 → 962
    Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
    cl15692
    Location:1 → 304
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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