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ACOX1 acyl-CoA oxidase 1 [ Gavia stellata (red-throated loon) ]

Gene ID: 104264359, updated on 3-Aug-2024

Summary

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Gene symbol
ACOX1
Gene description
acyl-CoA oxidase 1
Locus tag
N328_10472
See related
EnsemblRapid:ENSGSTG00005007438
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See ACOX1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 22 NC_082615.1 (6208217..6228927)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009284697.1 (765..19071)

Chromosome 22 - NC_082615.1Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase 3 Neighboring gene TEN1 subunit of CST complex Neighboring gene Fas binding factor 1 Neighboring gene mitochondrial ribosomal protein L38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 1
Names
Peroxisomal acyl-coenzyme A oxidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082615.1 Reference bGavSte3.hap2

    Range
    6208217..6228927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059828183.1 → XP_059684166.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X1

    Related
    ENSGSTP00005011229.1, ENSGSTT00005011765.1

  2. XM_059828184.1 → XP_059684167.1  peroxisomal acyl-coenzyme A oxidase 1 isoform X2

    Related
    ENSGSTP00005011276.1, ENSGSTT00005011813.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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