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GLT8D2 glycosyltransferase 8 domain containing 2 [ Gavia stellata (red-throated loon) ]

Gene ID: 104263948, updated on 3-Aug-2024

Summary

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Gene symbol
GLT8D2
Gene description
glycosyltransferase 8 domain containing 2
See related
EnsemblRapid:ENSGSTG00005011396
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See GLT8D2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 4 NC_082597.1 (62117722..62131802)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009282880.1 (1530..18003)

Chromosome 4 - NC_082597.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit beta Neighboring gene host cell factor C2 Neighboring gene thymine DNA glycosylase Neighboring gene chromosome unknown C12orf73 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase 8 domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082597.1 Reference bGavSte3.hap2

    Range
    62117722..62131802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059816875.1 → XP_059672858.1  glycosyltransferase 8 domain-containing protein 2 isoform X2

  2. XM_009820819.2 → XP_009819121.1  glycosyltransferase 8 domain-containing protein 2 isoform X1

    Related
    ENSGSTP00005017340.1, ENSGSTT00005018002.1
    Conserved Domains (1) summary
    cl11394
    Location:61 → 336
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_059816876.1 → XP_059672859.1  glycosyltransferase 8 domain-containing protein 2 isoform X3

    Related
    ENSGSTP00005017336.1, ENSGSTT00005017998.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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