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PLCB2 phospholipase C beta 2 [ Gavia stellata (red-throated loon) ]

Gene ID: 104260409, updated on 3-Aug-2024

Summary

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Gene symbol
PLCB2
Gene description
phospholipase C beta 2
Locus tag
N328_07258
See related
EnsemblRapid:ENSGSTG00005002853
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See PLCB2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 17 NC_082610.1 (1342841..1388257)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009316850.1 (14394..59452)

Chromosome 17 - NC_082610.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 9B Neighboring gene InaF motif containing 2 Neighboring gene p21 (RAC1) activated kinase 6 Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082610.1 Reference bGavSte3.hap2

    Range
    1342841..1388257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009816122.2 → XP_009814424.2  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2

    Related
    ENSGSTP00005004168.1, ENSGSTT00005004402.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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