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MAN1C1 mannosidase alpha class 1C member 1 [ Gavia stellata (red-throated loon) ]

Gene ID: 104259051, updated on 3-Aug-2024

Summary

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Gene symbol
MAN1C1
Gene description
mannosidase alpha class 1C member 1
See related
EnsemblRapid:ENSGSTG00005014193
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See MAN1C1 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 29 NC_082622.1 (4115987..4184289)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009311327.1 (17140..38118)

Chromosome 29 - NC_082622.1Genomic Context describing neighboring genes Neighboring gene macoilin 1 Neighboring gene low density lipoprotein receptor adaptor protein 1 Neighboring gene selenoprotein N Neighboring gene mitochondrial fission regulator 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082622.1 Reference bGavSte3.hap2

    Range
    4115987..4184289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059830630.1 → XP_059686613.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC

    Related
    ENSGSTP00005022061.1, ENSGSTT00005022930.1
Nucleotide Protein
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Gene LinkOut

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