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ACSL6 acyl-CoA synthetase long chain family member 6 [ Gavia stellata (red-throated loon) ]

Gene ID: 104256755, updated on 3-Aug-2024

Summary

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Gene symbol
ACSL6
Gene description
acyl-CoA synthetase long chain family member 6
Locus tag
N328_05104
See related
EnsemblRapid:ENSGSTG00005009660
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See ACSL6 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 16 NC_082609.1 (2469314..2498859)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009301768.1 (5340..34956, complement)

Chromosome 16 - NC_082609.1Genomic Context describing neighboring genes Neighboring gene PDZ and LIM domain 4 Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene meiotic kinetochore factor Neighboring gene folliculin interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 6
Names
Long-chain-fatty-acid--CoA ligase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082609.1 Reference bGavSte3.hap2

    Range
    2469314..2498859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059825642.1 → XP_059681625.1  long-chain-fatty-acid--CoA ligase 6 isoform X2

    Related
    ENSGSTP00005014461.1, ENSGSTT00005015053.1

  2. XM_059825643.1 → XP_059681626.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

  3. XM_059825644.1 → XP_059681627.1  long-chain-fatty-acid--CoA ligase 6 isoform X4

  4. XM_059825646.1 → XP_059681629.1  long-chain-fatty-acid--CoA ligase 6 isoform X6

  5. XM_059825645.1 → XP_059681628.1  long-chain-fatty-acid--CoA ligase 6 isoform X5

  6. XM_059825641.1 → XP_059681624.1  long-chain-fatty-acid--CoA ligase 6 isoform X1

Nucleotide Protein
Heading Accession and Version

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