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ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 [ Gavia stellata (red-throated loon) ]

Gene ID: 104252559, updated on 3-Aug-2024

Summary

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Gene symbol
ORMDL1
Gene description
ORMDL sphingolipid biosynthesis regulator 1
Locus tag
N328_09782
See related
EnsemblRapid:ENSGSTG00005002025
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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See ORMDL1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 8 NC_082601.1 (35646269..35653394)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009300186.1 (1267..5999)

Chromosome 8 - NC_082601.1Genomic Context describing neighboring genes Neighboring gene myostatin Neighboring gene PMS1 homolog 1, mismatch repair system component Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene asparagine synthetase domain containing 1 Neighboring gene ASNSD1 upstream open reading frame

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ORM1-like protein 1
Names
ORM1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082601.1 Reference bGavSte3.hap2

    Range
    35646269..35653394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059820102.1 → XP_059676085.1  ORM1-like protein 1

  2. XM_059820100.1 → XP_059676083.1  ORM1-like protein 1

    Related
    ENSGSTP00005003154.1, ENSGSTT00005003223.1

  3. XM_059820101.1 → XP_059676084.1  ORM1-like protein 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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