U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LYPLA1 lysophospholipase 1 [ Gavia stellata (red-throated loon) ]

Gene ID: 104251990, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LYPLA1
Gene description
lysophospholipase 1
Locus tag
N328_08959
See related
EnsemblRapid:ENSGSTG00005013589
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LYPLA1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 3 NC_082596.1 (43938365..43952075)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009294985.1 (8701..18134, complement)

Chromosome 3 - NC_082596.1Genomic Context describing neighboring genes Neighboring gene transcription factor SOX-17-like Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene transcription elongation factor A1 Neighboring gene regulator of G protein signaling 20

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acyl-protein thioesterase 1
Names
Acyl-protein thioesterase 1
lysophospholipase I

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082596.1 Reference bGavSte3.hap2

    Range
    43938365..43952075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059815254.1 → XP_059671237.1  acyl-protein thioesterase 1 isoform X2

  2. XM_059815253.1 → XP_059671236.1  acyl-protein thioesterase 1 isoform X1

    Related
    ENSGSTP00005020795.1, ENSGSTT00005021637.1

  3. XM_059815255.1 → XP_059671238.1  acyl-protein thioesterase 1 isoform X3

  4. XM_059815257.1 → XP_059671240.1  acyl-protein thioesterase 1 isoform X5

  5. XM_059815256.1 → XP_059671239.1  acyl-protein thioesterase 1 isoform X4

  6. XM_009809054.2 → XP_009807356.1  acyl-protein thioesterase 1 isoform X6

    See identical proteins and their annotated locations for XP_009807356.1

    Conserved Domains (1) summary
    pfam02230
    Location:8 → 177
    Abhydrolase_2; Phospholipase/Carboxylesterase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.