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LOC104248019 sterol 3-beta-glucosyltransferase UGT80A2-like [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104248019, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104248019
Gene description
sterol 3-beta-glucosyltransferase UGT80A2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104248019 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009519765.1 (108700..125395, complement)

NW_009519765.1Genomic Context describing neighboring genes Neighboring gene protein LUTEIN DEFICIENT 5, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009519765.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol 3-beta-glucosyltransferase UGT80A2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009519765.1 Reference Nsyl Primary Assembly

    Range
    108700..125395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009804193.1 → XP_009802495.1  sterol 3-beta-glucosyltransferase UGT80A2-like isoform X1

    UniProtKB/TrEMBL
    A0A1U7YUP1
    Conserved Domains (2) summary
    cd03784
    Location:174 → 602
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:174 → 597
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]

  2. XM_009804194.1 → XP_009802496.1  sterol 3-beta-glucosyltransferase UGT80A2-like isoform X2

    UniProtKB/TrEMBL
    A0A1U7YKJ0
    Conserved Domains (2) summary
    cd03784
    Location:174 → 588
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:174 → 583
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
Nucleotide Protein
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