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LOC104247379 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104247379, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104247379
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104247379 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009518553.1 (120826..137422, complement)

NW_009518553.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104247376 Neighboring gene uncharacterized LOC104247378 Neighboring gene protein trichome birefringence-like 8 Neighboring gene vacuolar protein sorting-associated protein 55 homolog Neighboring gene NAC domain-containing protein 90-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009518553.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009518553.1 Reference Nsyl Primary Assembly

    Range
    120826..137422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009803380.1 → XP_009801682.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

    See identical proteins and their annotated locations for XP_009801682.1

    UniProtKB/TrEMBL
    A0A1U7YR30
    Conserved Domains (5) summary
    COG0457
    Location:177 → 451
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:402 → 434
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:81 → 147
    TPR_11; TPR repeat
    cl10013
    Location:488 → 846
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  2. XM_009803382.1 → XP_009801684.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY

    See identical proteins and their annotated locations for XP_009801684.1

    UniProtKB/TrEMBL
    A0A1U7YR30
    Conserved Domains (5) summary
    COG0457
    Location:177 → 451
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:334 → 362
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:402 → 434
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:81 → 147
    TPR_11; TPR repeat
    cl10013
    Location:488 → 846
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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