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LOC104245197 probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104245197, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104245197
Gene description
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104245197 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009514931.1 (3231..15700, complement)

NW_009514931.1Genomic Context describing neighboring genes Neighboring gene protein transport protein SEC23-like Neighboring gene uncharacterized LOC104245200

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009514931.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009514931.1 Reference Nsyl Primary Assembly

    Range
    3231..15700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009800766.1 → XP_009799068.1  probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC

    UniProtKB/TrEMBL
    A0A1U7Y7I0
    Conserved Domains (8) summary
    COG3914
    Location:358 → 963
    Spy; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
    sd00006
    Location:197 → 225
    TPR; TPR repeat [structural motif]
    cd15832
    Location:434 → 464
    SNAP; TPR repeat [structural motif]
    pfam00515
    Location:334 → 366
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:231 → 296
    TPR_11; TPR repeat
    pfam13431
    Location:355 → 388
    TPR_17; Tetratricopeptide repeat
    cl10013
    Location:600 → 960
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
    cl24038
    Location:408 → 495
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

RNA

  1. XR_715669.1 RNA Sequence

Nucleotide Protein
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