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LOC104236320 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104236320, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104236320
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104236320 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009443024.1 (77307..84704)

NW_009443024.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009443024.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009443024.1 Reference Nsyl Primary Assembly

    Range
    77307..84704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009790223.1 → XP_009788525.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

    See identical proteins and their annotated locations for XP_009788525.1

    UniProtKB/TrEMBL
    A0A1U7XPW1
    Conserved Domains (3) summary
    cd03788
    Location:59 → 545
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 845
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:595 → 829
    Trehalose_PPase; Trehalose-phosphatase

  2. XM_009790224.1 → XP_009788526.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

    See identical proteins and their annotated locations for XP_009788526.1

    UniProtKB/TrEMBL
    A0A1U7XPW1
    Conserved Domains (3) summary
    cd03788
    Location:59 → 545
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 845
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:595 → 829
    Trehalose_PPase; Trehalose-phosphatase

  3. XM_009790222.1 → XP_009788524.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

    See identical proteins and their annotated locations for XP_009788524.1

    UniProtKB/TrEMBL
    A0A1U7XPW1
    Conserved Domains (3) summary
    cd03788
    Location:59 → 545
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 845
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:595 → 829
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
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