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LOC104234769 pectinesterase/pectinesterase inhibitor PPE8B-like [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104234769, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104234769
Gene description
pectinesterase/pectinesterase inhibitor PPE8B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104234769 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009346358.1 (54571..59245, complement)

NW_009346358.1Genomic Context describing neighboring genes Neighboring gene purine permease 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009346358.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase/pectinesterase inhibitor PPE8B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009346358.1 Reference Nsyl Primary Assembly

    Range
    54571..59245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009788404.1 → XP_009786706.1  pectinesterase/pectinesterase inhibitor PPE8B-like

    UniProtKB/TrEMBL
    A0A1U7XAM0
    Conserved Domains (3) summary
    PLN02201
    Location:31 → 537
    PLN02201; probable pectinesterase/pectinesterase inhibitor
    cd15799
    Location:32 → 169
    PMEI-like_4; plant invertase/pectin methylesterase inhibitor domain-containing protein
    pfam01095
    Location:231 → 521
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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