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LOC104225309 galacturonosyltransferase 8 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104225309, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104225309
Gene description
galacturonosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104225309 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009572356.1 (20794..25389, complement)

NW_009572356.1Genomic Context describing neighboring genes Neighboring gene putative G3BP-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009572356.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009572356.1 Reference Nsyl Primary Assembly

    Range
    20794..25389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009777084.1 → XP_009775386.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    A0A1U7WDQ8
    Conserved Domains (2) summary
    cd06429
    Location:256 → 553
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02523
    Location:20 → 566
    PLN02523; galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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