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LOC104222726 alpha-1,4-glucan-protein synthase [UDP-forming] 1 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104222726, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104222726
Gene description
alpha-1,4-glucan-protein synthase [UDP-forming] 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104222726 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009560310.1 (22280..25113)

NW_009560310.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104222727

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009560310.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-glucan-protein synthase [UDP-forming] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009560310.1 Reference Nsyl Primary Assembly

    Range
    22280..25113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009774006.1 → XP_009772308.1  alpha-1,4-glucan-protein synthase [UDP-forming] 1

    UniProtKB/TrEMBL
    A0A1U7W110
    Conserved Domains (1) summary
    PLN03180
    Location:1 → 344
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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