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LOC104218331 callose synthase 5 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104218331, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104218331
Gene description
callose synthase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104218331 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009544066.1 (18131..33456, complement)

NW_009544066.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104218332 Neighboring gene transcriptional corepressor SEUSS-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009544066.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009544066.1 Reference Nsyl Primary Assembly

    Range
    18131..33456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009768801.1 → XP_009767103.1  callose synthase 5

    UniProtKB/TrEMBL
    A0A1U7VL70
    Conserved Domains (3) summary
    pfam02364
    Location:1053 → 1796
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:61 → 168
    Vta1; Vta1 like
    pfam14288
    Location:337 → 449
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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