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LOC104217802 probable galacturonosyltransferase 3 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104217802, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104217802
Gene description
probable galacturonosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104217802 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009542720.1 (7..5338)

NW_009542720.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At2g17210 Neighboring gene protein NLP2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009542720.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009542720.1 Reference Nsyl Primary Assembly

    Range
    7..5338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009768131.1 → XP_009766433.1  probable galacturonosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A1U7VJD3
    Conserved Domains (2) summary
    cd06429
    Location:368 → 665
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02910
    Location:43 → 679
    PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase

  2. XM_009768132.1 → XP_009766434.1  probable galacturonosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A1U7VVK0
    Conserved Domains (2) summary
    cd06429
    Location:355 → 652
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02910
    Location:4 → 666
    PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase
Nucleotide Protein
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