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LOC104212521 mitochondrial arginine transporter BAC1 [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104212521, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104212521
Gene description
mitochondrial arginine transporter BAC1
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104212521 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009529287.1 (29366..36882, complement)

NW_009529287.1Genomic Context describing neighboring genes Neighboring gene squamosa promoter-binding protein 1 Neighboring gene protein FRIGIDA-ESSENTIAL 1-like Neighboring gene uncharacterized LOC104212524

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009529287.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009529287.1 Reference Nsyl Primary Assembly

    Range
    29366..36882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009761810.1 → XP_009760112.1  mitochondrial arginine transporter BAC1 isoform X2

    See identical proteins and their annotated locations for XP_009760112.1

    UniProtKB/TrEMBL
    A0A1U7VE69
    Conserved Domains (2) summary
    PTZ00169
    Location:15 → 282
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:8 → 97
    Mito_carr; Mitochondrial carrier protein

  2. XM_009761811.1 → XP_009760113.1  mitochondrial arginine transporter BAC1 isoform X3

    See identical proteins and their annotated locations for XP_009760113.1

    UniProtKB/TrEMBL
    A0A1U7VE69
    Conserved Domains (2) summary
    PTZ00169
    Location:15 → 282
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:8 → 97
    Mito_carr; Mitochondrial carrier protein

  3. XM_009761809.1 → XP_009760111.1  mitochondrial arginine transporter BAC1 isoform X1

    See identical proteins and their annotated locations for XP_009760111.1

    UniProtKB/TrEMBL
    A0A1U7VE69
    Conserved Domains (2) summary
    PTZ00169
    Location:15 → 282
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:8 → 97
    Mito_carr; Mitochondrial carrier protein

  4. XM_009761813.1 → XP_009760115.1  mitochondrial arginine transporter BAC1 isoform X4

    See identical proteins and their annotated locations for XP_009760115.1

    UniProtKB/TrEMBL
    A0A1U7VE69
    Conserved Domains (2) summary
    PTZ00169
    Location:15 → 282
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:8 → 97
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_707375.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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