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LOC104169290 pulmonary surfactant-associated protein D-like [ Cariama cristata (Red-legged seriema) ]

Gene ID: 104169290, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104169290
Gene description
pulmonary surfactant-associated protein D-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cariama cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Cariama
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Genomic context

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See LOC104169290 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM69053v1 (GCF_000690535.1) Unplaced Scaffold NW_009600844.1 (86120..90486, complement)

NW_009600844.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene pulmonary surfactant-associated protein A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009600844.1 Unplaced Scaffold Reference ASM69053v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cariama cristata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69053v1

Genomic

  1. NW_009600844.1 Reference ASM69053v1

    Range
    86120..90486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009710178.1 → XP_009708480.1  LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D-like

    Conserved Domains (3) summary
    pfam01391
    Location:47 → 98
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:107 → 149
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization
    cl02432
    Location:142 → 256
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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