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PLD1 phospholipase D1 [ Cariama cristata (Red-legged seriema) ]

Gene ID: 104161917, updated on 3-Aug-2024

Summary

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Gene symbol
PLD1
Gene description
phospholipase D1
Locus tag
N322_06596
Gene type
protein coding
RefSeq status
MODEL
Organism
Cariama cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Cariama
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PLD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM69053v1 (GCF_000690535.1) Unplaced Scaffold NW_009617329.1 (712..35778)

NW_009617329.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009617329.1 Unplaced Scaffold Reference ASM69053v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microvillus assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cariama cristata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69053v1

Genomic

  1. NW_009617329.1 Reference ASM69053v1

    Range
    712..35778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009700500.1 → XP_009698802.1  phospholipase D1

    See identical proteins and their annotated locations for XP_009698802.1

    UniProtKB/TrEMBL
    A0A091M3G2
    Conserved Domains (5) summary
    cd09842
    Location:150 → 300
    PLDc_vPLD1_1; Catalytic domain, repeat 1, of vertebrate phospholipase D1
    cd09844
    Location:555 → 736
    PLDc_vPLD1_2; Catalytic domain, repeat 2, of vertebrate phospholipase D1
    cd01254
    Location:1 → 124
    PH_PLD; Phospholipase D pleckstrin homology (PH) domain
    pfam00169
    Location:20 → 126
    PH; PH domain
    pfam13091
    Location:567 → 738
    PLDc_2; PLD-like domain
Nucleotide Protein
Heading Accession and Version

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