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NPL N-acetylneuraminate pyruvate lyase [ Struthio camelus (African ostrich) ]

Gene ID: 104142632, updated on 30-Oct-2024

Summary

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Gene symbol
NPL
Gene description
N-acetylneuraminate pyruvate lyase
Locus tag
N308_02171
See related
Ensembl:ENSSCUG00000004896
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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See NPL in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_10 current bStrCam1.hap1 (GCF_040807025.1) 8 NC_090949.1 (4722569..4734882, complement)

Chromosome 8 - NC_090949.1Genomic Context describing neighboring genes Neighboring gene SHC binding and spindle associated 1 like Neighboring gene DExH-box helicase 9 Neighboring gene uncharacterized LOC104142633 Neighboring gene small nucleolar RNA SNORD47 Neighboring gene small nucleolar RNA SNORD79 Neighboring gene heme binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090949.1 Chromosome 8 Reference bStrCam1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylneuraminate lyase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040807025.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrCam1.hap1

Genomic

  1. NC_090949.1 Reference bStrCam1.hap1

    Range
    4722569..4734882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068951721.1 → XP_068807822.1  N-acetylneuraminate lyase isoform X1

  2. XM_068951726.1 → XP_068807827.1  N-acetylneuraminate lyase isoform X3

  3. XM_068951725.1 → XP_068807826.1  N-acetylneuraminate lyase isoform X2

  4. XM_068951722.1 → XP_068807823.1  N-acetylneuraminate lyase isoform X2

  5. XM_068951724.1 → XP_068807825.1  N-acetylneuraminate lyase isoform X2

  6. XM_068951723.1 → XP_068807824.1  N-acetylneuraminate lyase isoform X2

Nucleotide Protein
Heading Accession and Version

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