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PLEC plectin [ Struthio camelus (African ostrich) ]

Gene ID: 104142028, updated on 30-Oct-2024

Summary

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Gene symbol
PLEC
Gene description
plectin
Locus tag
N308_15831
See related
Ensembl:ENSSCUG00000004580
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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See PLEC in Genome Data Viewer
Location:
chromosome: 2
Exon count:
46
Annotation release Status Assembly Chr Location
RS_2024_10 current bStrCam1.hap1 (GCF_040807025.1) 2 NC_090943.1 (173120910..173205190)

Chromosome 2 - NC_090943.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene microtubule-actin cross-linking factor 1 Neighboring gene epiplakin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090943.1 Chromosome 2 Reference bStrCam1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables keratin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040807025.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrCam1.hap1

Genomic

  1. NC_090943.1 Reference bStrCam1.hap1

    Range
    173120910..173205190
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068933658.1 → XP_068789759.1  plectin isoform X9

  2. XM_068933657.1 → XP_068789758.1  plectin isoform X9

  3. XM_068933662.1 → XP_068789763.1  plectin isoform X10

  4. XM_068933663.1 → XP_068789764.1  plectin isoform X11

  5. XM_068933659.1 → XP_068789760.1  plectin isoform X9

  6. XM_068933661.1 → XP_068789762.1  plectin isoform X9

  7. XM_068933672.1 → XP_068789773.1  plectin isoform X19

  8. XM_068933666.1 → XP_068789767.1  plectin isoform X14

  9. XM_068933668.1 → XP_068789769.1  plectin isoform X16

  10. XM_068933670.1 → XP_068789771.1  plectin isoform X18

  11. XM_068933674.1 → XP_068789775.1  plectin isoform X21

  12. XM_068933653.1 → XP_068789754.1  plectin isoform X5

  13. XM_068933655.1 → XP_068789756.1  plectin isoform X7

  14. XM_068933654.1 → XP_068789755.1  plectin isoform X6

  15. XM_068933656.1 → XP_068789757.1  plectin isoform X8

  16. XM_068933675.1 → XP_068789776.1  plectin isoform X22

  17. XM_068933676.1 → XP_068789777.1  plectin isoform X23

  18. XM_068933664.1 → XP_068789765.1  plectin isoform X12

  19. XM_068933665.1 → XP_068789766.1  plectin isoform X13

  20. XM_068933667.1 → XP_068789768.1  plectin isoform X15

  21. XM_068933669.1 → XP_068789770.1  plectin isoform X17

  22. XM_068933673.1 → XP_068789774.1  plectin isoform X20

  23. XM_068933648.1 → XP_068789749.1  plectin isoform X1

  24. XM_068933651.1 → XP_068789752.1  plectin isoform X3

  25. XM_068933650.1 → XP_068789751.1  plectin isoform X2

  26. XM_068933652.1 → XP_068789753.1  plectin isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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