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LOC104140163 C-terminal-binding protein 2 [ Struthio camelus (African ostrich) ]

Gene ID: 104140163, updated on 9-Oct-2024

Summary

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Gene symbol
LOC104140163
Gene description
C-terminal-binding protein 2
Locus tag
N308_09172
See related
Ensembl:ENSSCUG00000001815
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
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Genomic context

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See LOC104140163 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_10 current bStrCam1.hap1 (GCF_040807025.1) 13 NC_090954.1 (293766..305885, complement)

Chromosome 13 - NC_090954.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104140160 Neighboring gene lysine demethylase 3B Neighboring gene cell division cycle 25C Neighboring gene GDNF family receptor alpha 3 Neighboring gene cell division cycle 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090954.1 Chromosome 13 Reference bStrCam1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040807025.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrCam1.hap1

Genomic

  1. NC_090954.1 Reference bStrCam1.hap1

    Range
    293766..305885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068959147.1 → XP_068815248.1  C-terminal-binding protein 2 isoform X2

  2. XM_068959146.1 → XP_068815247.1  C-terminal-binding protein 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases