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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group) [ Struthio camelus (African ostrich) ]

Gene ID: 104140021, updated on 14-Nov-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (Globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_10 current bStrCam1.hap1 (GCF_040807025.1) 9 NC_090950.1 (31043504..31084850, complement)

Chromosome 9 - NC_090950.1Genomic Context describing neighboring genes Neighboring gene NMD3 ribosome export adaptor Neighboring gene uncharacterized LOC104140023 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene ARF like GTPase 14 Neighboring gene small Cajal body-specific RNA 7 Neighboring gene karyopherin subunit alpha 4 Neighboring gene uncharacterized LOC138068165 Neighboring gene tripartite motif containing 59

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090950.1 Chromosome 9 Reference bStrCam1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040807025.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bStrCam1.hap1

Genomic

  1. NC_090950.1 Reference bStrCam1.hap1

    Range
    31043504..31084850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068954331.1 → XP_068810432.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  2. XM_068954336.1 → XP_068810437.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  3. XM_068954332.1 → XP_068810433.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  4. XM_068954333.1 → XP_068810434.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  5. XM_068954340.1 → XP_068810441.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  6. XM_068954339.1 → XP_068810440.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  7. XM_068954341.1 → XP_068810442.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  8. XM_068954335.1 → XP_068810436.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  9. XM_068954343.1 → XP_068810444.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  10. XM_068954338.1 → XP_068810439.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

  11. XM_068954337.1 → XP_068810438.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

RNA

  1. XR_011142832.1 RNA Sequence

  2. XR_011142831.1 RNA Sequence

  3. XR_011142830.1 RNA Sequence

  4. XR_011142828.1 RNA Sequence

  5. XR_011142829.1 RNA Sequence

  6. XR_011142827.1 RNA Sequence

  7. XR_011142826.1 RNA Sequence

  8. XR_011142833.1 RNA Sequence

Nucleotide Protein
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