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LOC104135702 ALG13 UDP-N-acetylglucosaminyltransferase subunit [ Egretta garzetta (little egret) ]

Gene ID: 104135702, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104135702
Gene description
ALG13 UDP-N-acetylglucosaminyltransferase subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Also known as
ALG13
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Genomic context

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See LOC104135702 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258770.1 (365764..389666)

NW_009258770.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG13 homolog Neighboring gene serine rich and transmembrane domain containing 2 Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene angiomotin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258770 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Names
UDP-N-acetylglucosamine transferase subunit ALG13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258770.1 Reference ASM68718v1 Primary Assembly

    Range
    365764..389666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035889063.1 → XP_035744956.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13

    Conserved Domains (3) summary
    PHA03247
    Location:397 → 828
    PHA03247; large tegument protein UL36; Provisional
    cd20447
    Location:268 → 347
    Tudor_TDRD13; Tudor domain found in Tudor domain-containing protein 13 (TDRD13)
    cl19932
    Location:29 → 92
    OTU; OTU-like cysteine protease
Nucleotide Protein
Heading Accession and Version

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