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ACSL3 acyl-CoA synthetase long chain family member 3 [ Egretta garzetta (little egret) ]

Gene ID: 104135471, updated on 3-Aug-2024

Summary

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Gene symbol
ACSL3
Gene description
acyl-CoA synthetase long chain family member 3
Locus tag
Z169_02903
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See ACSL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258754.1 (1316966..1351794, complement)

NW_009258754.1Genomic Context describing neighboring genes Neighboring gene secretogranin II Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 4 Neighboring gene monoacylglycerol O-acyltransferase 1 Neighboring gene phenylalanyl-tRNA synthetase subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258754 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 3
Names
Long-chain-fatty-acid--CoA ligase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258754.1 Reference ASM68718v1 Primary Assembly

    Range
    1316966..1351794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009649130.2 → XP_009647425.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 708
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_035888849.1 → XP_035744742.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 708
    AFD_class_I; Adenylate forming domain, Class I superfamily

  3. XM_035888848.1 → XP_035744741.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 708
    AFD_class_I; Adenylate forming domain, Class I superfamily

  4. XM_035888851.1 → XP_035744744.1  long-chain-fatty-acid--CoA ligase 3 isoform X2

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 609
    AFD_class_I; Adenylate forming domain, Class I superfamily

  5. XM_035888853.1 → XP_035744746.1  long-chain-fatty-acid--CoA ligase 3 isoform X4

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

  6. XM_035888852.1 → XP_035744745.1  long-chain-fatty-acid--CoA ligase 3 isoform X3

    UniProtKB/TrEMBL
    A0A091ISR3
    Conserved Domains (1) summary
    cl17068
    Location:32 → 605
    AFD_class_I; Adenylate forming domain, Class I superfamily

RNA

  1. XR_004841219.1 RNA Sequence

  2. XR_004841220.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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