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PPT1 palmitoyl-protein thioesterase 1 [ Egretta garzetta (little egret) ]

Gene ID: 104134971, updated on 3-Aug-2024

Summary

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Gene symbol
PPT1
Gene description
palmitoyl-protein thioesterase 1
Locus tag
Z169_00232
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See PPT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258666.1 (1456408..1462610)

NW_009258666.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 31 Neighboring gene sodium-dependent phosphate transport protein 3-like Neighboring gene ribosomal protein L11 Neighboring gene uncharacterized LOC118451637 Neighboring gene cyclase associated actin cytoskeleton regulatory protein 1 Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258666 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyl-protein thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258666.1 Reference ASM68718v1 Primary Assembly

    Range
    1456408..1462610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009648575.2 → XP_009646870.1  palmitoyl-protein thioesterase 1

    UniProtKB/TrEMBL
    A0A091ITV5
    Conserved Domains (1) summary
    cl21494
    Location:61 → 326
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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