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SUMF1 sulfatase modifying factor 1 [ Egretta garzetta (little egret) ]

Gene ID: 104132667, updated on 3-Aug-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Locus tag
Z169_04881
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260758.1 (655077..700215)

NW_009260758.1Genomic Context describing neighboring genes Neighboring gene class E basic helix-loop-helix protein 40 Neighboring gene basic helix-loop-helix family member e40 Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene leucine rich repeat neuronal 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260758 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme
Names
Sulfatase-modifying factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260758.1 Reference ASM68718v1 Primary Assembly

    Range
    655077..700215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035901397.1 → XP_035757290.1  formylglycine-generating enzyme isoform X1

    Conserved Domains (1) summary
    pfam03781
    Location:15 → 265
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  2. XM_009645991.2 → XP_009644286.2  formylglycine-generating enzyme isoform X2

    UniProtKB/TrEMBL
    A0A091JPD2
    Conserved Domains (1) summary
    pfam03781
    Location:15 → 292
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  3. XM_035901398.1 → XP_035757291.1  formylglycine-generating enzyme isoform X3

    UniProtKB/TrEMBL
    A0A091JPD2
    Conserved Domains (1) summary
    pfam03781
    Location:15 → 272
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  4. XM_035901399.1 → XP_035757292.1  formylglycine-generating enzyme isoform X4

    UniProtKB/TrEMBL
    A0A091JPD2
    Conserved Domains (1) summary
    pfam03781
    Location:15 → 231
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  5. XM_035901400.1 → XP_035757293.1  formylglycine-generating enzyme isoform X5

    UniProtKB/TrEMBL
    A0A091JPD2
    Conserved Domains (1) summary
    pfam03781
    Location:15 → 231
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1

  6. XM_035901401.1 → XP_035757294.1  formylglycine-generating enzyme isoform X6

    Conserved Domains (1) summary
    cl23855
    Location:6 → 180
    FGE-sulfatase; Sulfatase-modifying factor enzyme 1
Nucleotide Protein
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