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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Egretta garzetta (little egret) ]

Gene ID: 104131984, updated on 3-Aug-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260616.1 (1603294..1608853, complement)

NW_009260616.1Genomic Context describing neighboring genes Neighboring gene laminin subunit alpha 4 Neighboring gene histone deacetylase 2 Neighboring gene collagen type X alpha 1 chain Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene fyn related Src family tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260616 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260616.1 Reference ASM68718v1 Primary Assembly

    Range
    1603294..1608853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009645213.2 → XP_009643508.2  LOW QUALITY PROTEIN: heparan sulfate glucosamine 3-O-sulfotransferase 5

    Conserved Domains (1) summary
    cl21551
    Location:86 → 317
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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