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ACSBG1 acyl-CoA synthetase bubblegum family member 1 [ Egretta garzetta (little egret) ]

Gene ID: 104130744, updated on 3-Aug-2024

Summary

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Gene symbol
ACSBG1
Gene description
acyl-CoA synthetase bubblegum family member 1
Locus tag
Z169_06581
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See ACSBG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260435.1 (3980069..4024275)

NW_009260435.1Genomic Context describing neighboring genes Neighboring gene SKI8 subunit of superkiller complex Neighboring gene DnaJ heat shock protein family (Hsp40) member A4 Neighboring gene isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha Neighboring gene calcium and integrin binding family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260435 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase ACSBG1
Names
Long-chain-fatty-acid--CoA ligase ACSBG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260435.1 Reference ASM68718v1 Primary Assembly

    Range
    3980069..4024275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035899587.1 → XP_035755480.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X3

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cd05933
    Location:18 → 613
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)

  2. XM_035899589.1 → XP_035755482.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X3

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cd05933
    Location:18 → 613
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)

  3. XM_035899588.1 → XP_035755481.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X3

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cd05933
    Location:18 → 613
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)

  4. XM_035899585.1 → XP_035755478.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X1

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cd05933
    Location:65 → 660
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)

  5. XM_035899586.1 → XP_035755479.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X2

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cd05933
    Location:65 → 659
    ACSBG_like; Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)

  6. XM_035899590.1 → XP_035755483.1  long-chain-fatty-acid--CoA ligase ACSBG1 isoform X4

    UniProtKB/TrEMBL
    A0A091JJL7
    Conserved Domains (1) summary
    cl17068
    Location:13 → 511
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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