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ACADSB acyl-CoA dehydrogenase short/branched chain [ Egretta garzetta (little egret) ]

Gene ID: 104128327, updated on 3-Aug-2024

Summary

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Gene symbol
ACADSB
Gene description
acyl-CoA dehydrogenase short/branched chain
Locus tag
Z169_09403
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See ACADSB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260063.1 (1485881..1507464, complement)

NW_009260063.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 26 Neighboring gene BUB3 mitotic checkpoint protein Neighboring gene IKAROS family zinc finger 5 Neighboring gene phosphoseryl-tRNA kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260063 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260063.1 Reference ASM68718v1 Primary Assembly

    Range
    1485881..1507464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035896571.1 → XP_035752464.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A091JA08
    Conserved Domains (1) summary
    cd01158
    Location:19 → 389
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

  2. XM_035896572.1 → XP_035752465.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl09933
    Location:19 → 291
    ACAD; Acyl-CoA dehydrogenase

RNA

  1. XR_004842316.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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