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LOC104127618 beta-1,3-galactosyltransferase 2-like [ Egretta garzetta (little egret) ]

Gene ID: 104127618, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104127618
Gene description
beta-1,3-galactosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
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Genomic context

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See LOC104127618 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259970.1 (1163409..1164572)

NW_009259970.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 D2-like Neighboring gene cell division cycle 73 Neighboring gene beta-1,3-galactosyltransferase 2 Neighboring gene potassium sodium-activated channel subfamily T member 2 Neighboring gene complement factor H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259970 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259970.1 Reference ASM68718v1 Primary Assembly

    Range
    1163409..1164572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009640305.1 → XP_009638600.1  beta-1,3-galactosyltransferase 2-like

    Conserved Domains (1) summary
    pfam01762
    Location:146 → 336
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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