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GBE1 1,4-alpha-glucan branching enzyme 1 [ Egretta garzetta (little egret) ]

Gene ID: 104127538, updated on 3-Aug-2024

Summary

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Gene symbol
GBE1
Gene description
1,4-alpha-glucan branching enzyme 1
Locus tag
Z169_08164
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See GBE1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259966.1 (551899..686923, complement)

NW_009259966.1Genomic Context describing neighboring genes Neighboring gene ATP synthase F1 subunit epsilon

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259966 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-alpha-glucan-branching enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259966.1 Reference ASM68718v1 Primary Assembly

    Range
    551899..686923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035895727.1 → XP_035751620.1  1,4-alpha-glucan-branching enzyme isoform X2

    UniProtKB/TrEMBL
    A0A091JBC3
    Conserved Domains (1) summary
    PLN02447
    Location:2 → 578
    PLN02447; 1,4-alpha-glucan-branching enzyme

  2. XM_035895726.1 → XP_035751619.1  1,4-alpha-glucan-branching enzyme isoform X1

    UniProtKB/TrEMBL
    A0A091JBC3
    Conserved Domains (1) summary
    PLN02447
    Location:2 → 568
    PLN02447; 1,4-alpha-glucan-branching enzyme
Nucleotide Protein
Heading Accession and Version

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