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UXS1 UDP-glucuronate decarboxylase 1 [ Egretta garzetta (little egret) ]

Gene ID: 104126365, updated on 3-Aug-2024

Summary

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Gene symbol
UXS1
Gene description
UDP-glucuronate decarboxylase 1
Locus tag
Z169_11750
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See UXS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259707.1 (2139240..2191191)

NW_009259707.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene pinopsin Neighboring gene ST6 beta-galactoside alpha-2,6-sialyltransferase 2 Neighboring gene ECRG4 augurin precursor Neighboring gene NCK adaptor protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259707 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucuronate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronic acid decarboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259707.1 Reference ASM68718v1 Primary Assembly

    Range
    2139240..2191191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035894390.1 → XP_035750283.1  UDP-glucuronic acid decarboxylase 1 isoform X2

    UniProtKB/TrEMBL
    A0A091JX33
    Conserved Domains (2) summary
    cd05230
    Location:50 → 353
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    pfam11803
    Location:1 → 39
    UXS1_N; UDP-glucuronate decarboxylase N-terminal

  2. XM_035894391.1 → XP_035750284.1  UDP-glucuronic acid decarboxylase 1 isoform X3

    Conserved Domains (1) summary
    cd05230
    Location:2 → 240
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

  3. XM_035894389.1 → XP_035750282.1  UDP-glucuronic acid decarboxylase 1 isoform X1

    UniProtKB/TrEMBL
    A0A091JX33
    Conserved Domains (1) summary
    cd05230
    Location:78 → 377
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
Nucleotide Protein
Heading Accession and Version

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