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MAN2B2 mannosidase alpha class 2B member 2 [ Egretta garzetta (little egret) ]

Gene ID: 104123263, updated on 3-Aug-2024

Summary

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Gene symbol
MAN2B2
Gene description
mannosidase alpha class 2B member 2
Locus tag
Z169_03844
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See MAN2B2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259117.1 (113008..141820, complement)

NW_009259117.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118451959 Neighboring gene S100 calcium binding protein P Neighboring gene protein phosphatase 2 regulatory subunit Bgamma Neighboring gene wolframin ER transmembrane glycoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259117 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epididymis-specific alpha-mannosidase
Names
Epididymis-specific alpha-mannosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259117.1 Reference ASM68718v1 Primary Assembly

    Range
    113008..141820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035891119.1 → XP_035747012.1  epididymis-specific alpha-mannosidase isoform X3

    UniProtKB/TrEMBL
    A0A091IXU2
    Conserved Domains (2) summary
    PLN02701
    Location:11 → 753
    PLN02701; alpha-mannosidase
    cl15692
    Location:1 → 304
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily

  2. XM_035891120.1 → XP_035747013.1  epididymis-specific alpha-mannosidase isoform X3

    UniProtKB/TrEMBL
    A0A091IXU2
    Conserved Domains (2) summary
    PLN02701
    Location:11 → 753
    PLN02701; alpha-mannosidase
    cl15692
    Location:1 → 304
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily

  3. XM_035891118.1 → XP_035747011.1  epididymis-specific alpha-mannosidase isoform X2

    UniProtKB/TrEMBL
    A0A091IXU2
    Conserved Domains (2) summary
    PLN02701
    Location:11 → 753
    PLN02701; alpha-mannosidase
    cl15692
    Location:1 → 304
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily

  4. XM_009635497.2 → XP_009633792.1  epididymis-specific alpha-mannosidase isoform X1

    UniProtKB/TrEMBL
    A0A091IXU2
    Conserved Domains (3) summary
    smart00872
    Location:310 → 391
    Alpha-mann_mid; Alpha mannosidase, middle domain
    pfam07748
    Location:529 → 962
    Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
    cl15692
    Location:1 → 304
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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