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TRPM5 transient receptor potential cation channel subfamily M member 5 [ Egretta garzetta (little egret) ]

Gene ID: 104123219, updated on 3-Aug-2024

Summary

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Gene symbol
TRPM5
Gene description
transient receptor potential cation channel subfamily M member 5
Locus tag
Z169_01672
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See TRPM5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259111.1 (5736192..5776244)

NW_009259111.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 18 Neighboring gene potassium voltage-gated channel subfamily Q member 1 Neighboring gene tumor suppressing subtransferable candidate 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259111 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ligand-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transient receptor potential cation channel subfamily M member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259111.1 Reference ASM68718v1 Primary Assembly

    Range
    5736192..5776244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009635452.1 → XP_009633747.1  transient receptor potential cation channel subfamily M member 5

    UniProtKB/TrEMBL
    A0A091J087
    Conserved Domains (1) summary
    pfam00520
    Location:748 → 987
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

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