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NAP1L4 nucleosome assembly protein 1 like 4 [ Egretta garzetta (little egret) ]

Gene ID: 104123217, updated on 3-Aug-2024

Summary

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Gene symbol
NAP1L4
Gene description
nucleosome assembly protein 1 like 4
Locus tag
Z169_01663
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See NAP1L4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259111.1 (5169173..5197368)

NW_009259111.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 5 Neighboring gene cysteinyl-tRNA synthetase 1 Neighboring gene small nucleolar RNA SNORA54 Neighboring gene small nucleolar RNA SNORA54 Neighboring gene solute carrier family 22 member 18 Neighboring gene pleckstrin homology like domain family A member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259111 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleosome assembly protein 1-like 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259111.1 Reference ASM68718v1 Primary Assembly

    Range
    5169173..5197368
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035890933.1 → XP_035746826.1  nucleosome assembly protein 1-like 4 isoform X2

    Conserved Domains (1) summary
    pfam00956
    Location:141 → 410
    NAP; Nucleosome assembly protein (NAP)

  2. XM_035890932.1 → XP_035746825.1  nucleosome assembly protein 1-like 4 isoform X1

    Conserved Domains (1) summary
    pfam00956
    Location:141 → 410
    NAP; Nucleosome assembly protein (NAP)

  3. XM_035890934.1 → XP_035746827.1  nucleosome assembly protein 1-like 4 isoform X3

    Conserved Domains (1) summary
    pfam00956
    Location:126 → 395
    NAP; Nucleosome assembly protein (NAP)

  4. XM_035890935.1 → XP_035746828.1  nucleosome assembly protein 1-like 4 isoform X4

    Conserved Domains (1) summary
    pfam00956
    Location:121 → 390
    NAP; Nucleosome assembly protein (NAP)

  5. XM_035890936.1 → XP_035746829.1  nucleosome assembly protein 1-like 4 isoform X5

    UniProtKB/TrEMBL
    A0A091IXN7
    Conserved Domains (1) summary
    pfam00956
    Location:66 → 335
    NAP; Nucleosome assembly protein (NAP)

  6. XM_035890937.1 → XP_035746830.1  nucleosome assembly protein 1-like 4 isoform X5

    UniProtKB/TrEMBL
    A0A091IXN7
    Conserved Domains (1) summary
    pfam00956
    Location:66 → 335
    NAP; Nucleosome assembly protein (NAP)

  7. XM_009635449.2 → XP_009633744.1  nucleosome assembly protein 1-like 4 isoform X5

    UniProtKB/TrEMBL
    A0A091IXN7
    Conserved Domains (1) summary
    pfam00956
    Location:66 → 335
    NAP; Nucleosome assembly protein (NAP)

  8. XM_035890938.1 → XP_035746831.1  nucleosome assembly protein 1-like 4 isoform X6

    UniProtKB/TrEMBL
    A0A091IXN7
    Conserved Domains (1) summary
    pfam00956
    Location:47 → 316
    NAP; Nucleosome assembly protein (NAP)

RNA

  1. XR_004841528.1 RNA Sequence

  2. XR_004841529.1 RNA Sequence

Nucleotide Protein
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