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LOC104091428 cytochrome c oxidase subunit 2 [ Nicotiana tomentosiformis ]

Gene ID: 104091428, updated on 14-Dec-2023

Summary

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Gene symbol
LOC104091428
Gene description
cytochrome c oxidase subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana tomentosiformis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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See LOC104091428 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Ntom_v01 (GCF_000390325.2) Unplaced Scaffold NW_008941316.1 (427..3550, complement)

NW_008941316.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S3, mitochondrial Neighboring gene ATP synthase protein MI25-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008941316 Unplaced Scaffold Reference Ntom_v01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana tomentosiformis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntom_v01 Primary Assembly

Genomic

  1. NW_008941316.1 Reference Ntom_v01 Primary Assembly

    Range
    427..3550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009596758.2 → XP_009595053.1  cytochrome c oxidase subunit 2

    Conserved Domains (3) summary
    MTH00023
    Location:34 → 270
    COX2; cytochrome c oxidase subunit II; Validated
    cd13912
    Location:133 → 264
    CcO_II_C; C-terminal domain of Cytochrome c Oxidase subunit II
    pfam02790
    Location:36 → 122
    COX2_TM; Cytochrome C oxidase subunit II, transmembrane domain
Nucleotide Protein
Heading Accession and Version

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