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POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [ Cuculus canorus (common cuckoo) ]

Gene ID: 104068815, updated on 3-Aug-2024

Summary

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Gene symbol
POMGNT2
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
Locus tag
N303_10955
See related
EnsemblRapid:ENSCCOG00010007840
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See POMGNT2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 2 NC_071402.1 (118790441..118825478)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243896.1 (860751..870779, complement)

Chromosome 2 - NC_071402.1Genomic Context describing neighboring genes Neighboring gene SNF related kinase Neighboring gene uncharacterized LOC128851363 Neighboring gene golgi associated kinase 1A Neighboring gene ribosomal protein L14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
Names
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071402.1 Reference bCucCan1.pri

    Range
    118790441..118825478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054060650.1 → XP_053916625.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A091FRM3
    Related
    ENSCCOP00010011865.1, ENSCCOT00010014038.1

  2. XM_054060649.1 → XP_053916624.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A091FRM3
    Related
    ENSCCOP00010011817.1, ENSCCOT00010013978.1

  3. XM_054060651.1 → XP_053916626.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A091FRM3

  4. XM_054060652.1 → XP_053916627.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A091FRM3
    Related
    ENSCCOP00010011793.1, ENSCCOT00010013946.1
Nucleotide Protein
Heading Accession and Version

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