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LOC104067406 alpha 1,4-galactosyltransferase (P blood group) [ Cuculus canorus (common cuckoo) ]

Gene ID: 104067406, updated on 3-Aug-2024

Summary

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Gene symbol
LOC104067406
Gene description
alpha 1,4-galactosyltransferase (P blood group)
Locus tag
N303_14817
See related
EnsemblRapid:ENSCCOG00010009418
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
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Genomic context

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See LOC104067406 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 1 NC_071401.1 (134871704..134901555)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243672.1 (1462671..1471224, complement)

Chromosome 1 - NC_071401.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3 Neighboring gene uncharacterized LOC128851907 Neighboring gene alpha 1,4-galactosyltransferase (P1PK blood group) Neighboring gene poly(U)-specific endoribonuclease-A Neighboring gene NADH-cytochrome b5 reductase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
Lactosylceramide 4-alpha-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071401.1 Reference bCucCan1.pri

    Range
    134871704..134901555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054060163.1 → XP_053916138.1  lactosylceramide 4-alpha-galactosyltransferase

    Related
    ENSCCOP00010013781.1, ENSCCOT00010016689.1

  2. XM_054060150.1 → XP_053916125.1  lactosylceramide 4-alpha-galactosyltransferase

    Related
    ENSCCOP00010013765.1, ENSCCOT00010016663.1

  3. XM_054060158.1 → XP_053916133.1  lactosylceramide 4-alpha-galactosyltransferase

    Related
    ENSCCOP00010013779.1, ENSCCOT00010016688.1

  4. XM_054060144.1 → XP_053916119.1  lactosylceramide 4-alpha-galactosyltransferase

Nucleotide Protein
Heading Accession and Version

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