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HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104067329, updated on 3-Aug-2024

Summary

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Gene symbol
HSD17B12
Gene description
hydroxysteroid 17-beta dehydrogenase 12
See related
EnsemblRapid:ENSCCOG00010003785
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See HSD17B12 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 5 NC_071405.1 (48767487..48871222)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009258113.1 (1921971..1971846)

Chromosome 5 - NC_071405.1Genomic Context describing neighboring genes Neighboring gene apoptosis inhibitor 5 Neighboring gene tetratricopeptide repeat domain 17 Neighboring gene uncharacterized LOC128852218 Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene chromosome 5 C11orf96 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071405.1 Reference bCucCan1.pri

    Range
    48767487..48871222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054066730.1 → XP_053922705.1  very-long-chain 3-oxoacyl-CoA reductase isoform X2

  2. XM_054066729.1 → XP_053922704.1  very-long-chain 3-oxoacyl-CoA reductase isoform X1

    Related
    ENSCCOP00010005598.1, ENSCCOT00010006661.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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