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PDE9A phosphodiesterase 9A [ Cuculus canorus (common cuckoo) ]

Gene ID: 104059238, updated on 3-Aug-2024

Summary

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Gene symbol
PDE9A
Gene description
phosphodiesterase 9A
Locus tag
N303_14964
See related
EnsemblRapid:ENSCCOG00010008447
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See PDE9A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 1 NC_071401.1 (92329745..92384481, complement)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009245021.1 (2808876..2858844)

Chromosome 1 - NC_071401.1Genomic Context describing neighboring genes Neighboring gene PBX/knotted 1 homeobox 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit V3 Neighboring gene WD repeat domain 4 Neighboring gene solute carrier family 37 member 1 Neighboring gene radial spoke head component 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071401.1 Reference bCucCan1.pri

    Range
    92329745..92384481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054086986.1 → XP_053942961.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    UniProtKB/TrEMBL
    A0A091G476
    Related
    ENSCCOP00010012594.1, ENSCCOT00010014991.1

  2. XM_054086991.1 → XP_053942966.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

  3. XM_054087034.1 → XP_053943009.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X6

  4. XM_054086999.1 → XP_053942974.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

  5. XM_054087025.1 → XP_053943000.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X5

  6. XM_054087017.1 → XP_053942992.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

  7. XM_054087008.1 → XP_053942983.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

Nucleotide Protein
Heading Accession and Version

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