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CHGA chromogranin A [ Cuculus canorus (common cuckoo) ]

Gene ID: 104057772, updated on 3-Aug-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Locus tag
N303_15549
See related
EnsemblRapid:ENSCCOG00010014183
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 5 NC_071405.1 (24451238..24470648)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244715.1 (8162422..8173743, complement)

Chromosome 5 - NC_071405.1Genomic Context describing neighboring genes Neighboring gene legumain Neighboring gene golgin A5 Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene lysosomal enzyme trafficking factor Neighboring gene ubiquitin protein ligase E3 component n-recognin 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071405.1 Reference bCucCan1.pri

    Range
    24451238..24470648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009559195.2 → XP_009557490.1  chromogranin-A isoform X1

    UniProtKB/TrEMBL
    A0A091GLD4
    Related
    ENSCCOP00010020406.1, ENSCCOT00010025054.1
    Conserved Domains (1) summary
    pfam01271
    Location:25 → 466
    Granin; Granin (chromogranin or secretogranin)

  2. XM_054066883.1 → XP_053922858.1  chromogranin-A isoform X2

    Related
    ENSCCOP00010020397.1, ENSCCOT00010025039.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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